All software

MITK

Combines ITK and VTK with an application framework. Aims to reduce effort for interactive medical image analysis applications. Supports Windows, Linux, macOS.

MONAI

MonteRay

CPU MC dose calculation engine, capable of simulating therapeutic proton, helium, and carbon ion beams. Uses pre-computed nuclear event database. Aims for GPU acceleration in future.

mudicom

A Python library for interacting with DICOM files. Provides a simpler, more intuitive interface than other libraries. Archived by the owner on Jul 31, 2023.

MUSIMAN

In summary, the MUSIMAN package is a software tool to ease the parallelization of simulations run with the Monte Carlo code PENELOPE 2014

OMG Dosimetry

A Python package for performing dosimetry calculations and quality assurance tests. Provides a simple API for common dosimetry tasks.

OnkoDICOM

Cross-platform. Provides DVH output, clinical data capture (radiomics), Pyradiomics output, anonymization, ROI manipulation. Inspired by dicompyler.

Orthanc

Standalone DICOM server, abstracts DICOM complexity, RESTful API, supports plugins, available as Docker images. Recognized as a digital public good.

OsiriX

Widely used DICOM viewer. Supports 2D, 3D, 4D, 5D viewing. Plugin architecture. Commercial version "OsiriX MD" is FDA/CE certified. Open-source version has limited functionality. OSAIRIS is a cloud-based AI tool for automatic segmentation of radiotherapy images.

PARADIM

Uses PHITS for dose computation.

ParticlePhaseSpace

A set of tools for processing and analysing particle phase space files. Designed for use with Monte Carlo simulations, particularly for proton therapy.

PDFtoAria

A C# script for converting PDF documents into a format that can be imported into Varian ARIA. Automates the process of adding documents to ARIA.