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Cover image for 3D-e-Chem Virtual Machine

3D-e-Chem Virtual Machine

A freely available Virtual Machine encompassing tools, databases, and workflows for cheminformaticians, including new resources developed for ligand binding site comparisons and GPCR research.

  • Inter-operability & linked data
  • Workflow technologies
  • Shell
  • Smarty
2
3
Cover image for dCacheFS

dCacheFS

Python file-system interface for dCache storages.

  • Data
  • Inter-operability & linked data
  • Optimized data handling
  • + 1
  • Python
  • Jupyter Notebook
1
1
Cover image for eEcology Annotation Tool

eEcology Annotation Tool

Visualize and annotate GPS measurements of bird movements.

  • Inter-operability & linked data
  • Visualization
  • HTML
  • Python
  • Mako
  • + 5
1
6
Cover image for ewatercycle

ewatercycle

The eWaterCycle package makes it easier to use hydrological models without having intimate knowledge about how to install and run the models.

  • Inter-operability & linked data
  • Multi-scale & multi model simulations
  • Optimized data handling
  • + 1
  • Python
10
2
Cover image for FAIR Data Point

FAIR Data Point

RESTful web service that enables data owners to expose their data sets using rich machine-readable metadata.

  • Big data
  • Inter-operability & linked data
  • Python
  • Makefile
  • Dockerfile
6
3
Cover image for FAIRSECO

FAIRSECO

FAIRSECO provides a way to quickly analyse a variety of data and metrics of your software, and it allows you to explore the impact of your software on the academic world. Metadata is gathered from many different sources, which is then analysed and compiled into a clear overview.

  • Data Analysis
  • FAIR
  • Inter-operability & linked data
  • + 2
  • TypeScript
  • EJS
  • JavaScript
3
0
Cover image for grlc

grlc

Builds a web API from SPARQL queries hosted on GitHub to accessing triple store data.

  • garlic
  • Inter-operability & linked data
  • Python
  • HTML
  • TeX
  • + 4
3
5
Cover image for haddock3

haddock3

Haddock3 (High Ambiguity Driven protein-protein DOCKing) is a an information-driven flexible docking approach for the modeling of biomolecular complexes.

  • Inter-operability & linked data
  • Python
  • Fortran
  • NASL
  • + 2
10
2
Cover image for Hadrianus scripts

Hadrianus scripts

Scripts that transform cultural heritage relational databases into linked data by using cultural heritage ontologies.

  • Inter-operability & linked data
  • Shell
  • Perl
  • Python
2
0
Cover image for i-VRESSE jupyterlab haddock3 configurator

i-VRESSE jupyterlab haddock3 configurator

Jupter Lab extension to create/edit haddock3 configuration file.

  • Inter-operability & linked data
  • TypeScript
  • Python
  • JavaScript
  • + 1
1
0
Cover image for LitStudy

LitStudy

Analyze scientific literature using Python from the comfort of a Jupyter notebook

  • Inter-operability & linked data
  • Text analysis & natural language processing
  • Visualization
  • Python
  • HTML
7
2
Cover image for lofar-ld

lofar-ld

Publish LOFAR catalog as Linked Data.

  • Inter-operability & linked data
  • Makefile
6
0